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Biology 482/Computer science 411

Bioinformatics

This class will probably be offered in the Fall semester, every other year.

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Lecture handouts

bullet Syllabus, Fall 2005

Assignments (in/out of class)
bulletPubMed
bullet Finding protein sequences
bullet Finding DNA sequences
bullet BLAST and Clustal
bullet Nucleotide databases
bullet Genome databases
bullet Protein databases
bullet Analyzing DNA sequences
bulletVector DNA test sequence
bullet Analyzing DNA assignment
bullet Analyzing protein sequences
bullet Advanced BLAST
bullet Comparing two sequences
bullet Multiple alignments
bullet Entropy and editing alignments
bulletRNA structure
bullet Phylogenetics


Sequences
bulletDNA sequence
bulletProtein sequence
bulletTest analysis DNA
bulletTest DNA sequence 2
bulletU100 protein sequence
bulletU100 DNA sequence
bulletFoxP2 sequence
bulletHCV control sequences
bulletPatient sequences
bulletCultured sequences
bullet 3D protein structures
bulletTa protein
bulletTest genome
bulletGamma fibrinogen


Genomics project
bulletGenome closing strategy
bulletGenome closing-contigs
bullet Genome closing-primers
bullet Genome closing-part 2
bullet Genome project

 
bulletmore to come

Other links

bulletBLAST [home]   blastn    blastp    blastx
bulletExPASy [proteins]
bulletPubMed
bulletOnline Mendelian Inheritance in Man (OMIM).
 
Last updated on: February 20, 2007
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Copyright 2010 by Dr. Dennis Revie, all rights reserved.
For problems or questions regarding this web contact: revie@clunet.edu.